Insertion junction: CLIP2.001228_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.001228
Chromosome:chromosome 1
Location:6431077
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g045550 TPT3,APE2 Triose-phosphate transporter; (1 of 1) PTHR11132:SF31 - TRIOSE PHOSPHATE/PHOSPHATE TRANSLOCATOR TPT, CHLOROPLASTIC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGTGTGTGCAAGGGTGTCATCAGGTTCATGACTTGTCGGAAGATCAGG
Internal bar code:GGTGATTTGACATTACTCATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1693
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GGATGGCAAGGAAGCTGTCT
Suggested primer 2:CGGATATGCGGTTTTGCCAG