Insertion junction: CLIP2.001249_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.001249
Chromosome:chromosome 5
Location:168592
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g242600 CGL106 (1 of 2) IPR000679//IPR013088 - Zinc finger, GATA-type // Zinc finger, NHR/GATA-type; zinc finger GATA transcription factor 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGCGGCGATGGGGACAGTGCGCGGGCCACGCTTGCGACTCTCGCATGC
Internal bar code:CCAGCCGACACATACGTCACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2466
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:64
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:64

Suggested primers for confirmation by PCR

Suggested primer 1:CACACAGGCATCCTCCACAT
Suggested primer 2:CACCCCTGCAACTCTTTTGC