Insertion junction: CLIP2.001249_5

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.001249
Chromosome:chromosome 16
Location:1042107
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g649250 (1 of 4) PF13911 - AhpC/TSA antioxidant enzyme (AhpC-TSA_2) 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATCTTCCTTCCACCGCCGCAGCAGACGGTCGCCGCTGGAAGCGTGGAGG
Internal bar code:CGATCTGCTTATGTGCTTTCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:170
LEAP-Seq percent confirming:42.8571
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:AAGACGCATACAGGCACACA
Suggested primer 2:CGTTACATAGCGCTGCAACC