Insertion junction: CLIP2.001282_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.001282
Chromosome:chromosome 13
Location:141841
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g562850 THF1,PSB29 Thylakoid Formation 1; (1 of 1) PTHR34793:SF1 - PROTEIN THYLAKOID FORMATION 1, CHLOROPLASTIC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGATGGCACTCGCGGGATGGCGCGGGGGTTACGTGCGCACGGATACGGGT
Internal bar code:CAAGATGTTTAGTAGCGTCATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1114
LEAP-Seq percent confirming:95.2381
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GACGGACATCCTTTCCAGCA
Suggested primer 2:TTGGGTAGCGTTTTTGTGCG