Gene: Cre13.g562850
Overview
| Common name: | THF1,PSB29 |
| Defline: | Thylakoid Formation 1; (1 of 1) PTHR34793:SF1 - PROTEIN THYLAKOID FORMATION 1, CHLOROPLASTIC |
| Description: | Chloroplast-localized protein similar to Arabidopsis THF1 which has been involved in the dynamics of PSII-LHCII supramolecular organization in higher plants; the Cyanobacterial homolog stabilizes and interacts with the FtsH protease |
| Synonyms: | Cre13.g562850.t1.1,PSB29,g13851.t1 |
| Chromosome: | chromosome 13 |
Protein Localization
A plasmid for expressing Cre13.g562850 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre13.g562850-Venus-3xFLAG
Imaged strain: CSI_LW01D7
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
chloroplast/homogeneous/pyrenoid depleted
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.001282_1 | CLIP2.001282 | 3'UTR | 80 | 6.1 |
| CLIP2.001793_1 | CLIP2.001793 | 3'UTR | 80 | 6.1 |
| CLIP2.001793_2 | CLIP2.001793 | 3'UTR | 80 | 6.1 |
| CLIP2.004209_1 | CLIP2.004209 | 3'UTR | 80 | 6.1 |
| CLIP2.004209_2 | CLIP2.004209 | 3'UTR | 80 | 6.1 |
| LMJ.RY0402.108932_1 | LMJ.RY0402.108932 | intron | 95 | 5.5 |
| LMJ.RY0402.108932_2 | LMJ.RY0402.108932 | intron | 95 | 5.5 |
| LMJ.RY0402.112561_1 | LMJ.RY0402.112561 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.112561_2 | LMJ.RY0402.112561 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.125062_1 | LMJ.RY0402.125062 | 3'UTR | 73 | 5.5 |
| LMJ.RY0402.137514_1 | LMJ.RY0402.137514 | 3'UTR | 73 | 5.5 |
| LMJ.RY0402.183594_1 | LMJ.RY0402.183594 | 3'UTR | 73 | 5.5 |
| LMJ.RY0402.200543_1 | LMJ.RY0402.200543 | 3'UTR | 73 | 5.5 |
Gene Annotations
| PFAM: | PF11264 |
| PANTHER: | PTHR34793 PTHR34793:SF1 |
| KEGG_ec: | |
| KEGG_orthology: | |
| KOG: | |
| Gene ontology terms:: | GO:0010207, GO:0015979 |
| Best arabidopsis TAIR name: | AT2G20890 |
| Best arabidopsis TAIR symbol: | PSB29,THF1 |
| Best arabidopsis TAIR defline: | photosystem II reaction center PSB29 protein |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.