Insertion junction: CLIP2.004209_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.004209
Chromosome:chromosome 13
Location:142407
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g562850 THF1,PSB29 Thylakoid Formation 1; (1 of 1) PTHR34793:SF1 - PROTEIN THYLAKOID FORMATION 1, CHLOROPLASTIC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGCTTGGTGCATGCGGTATCAGCAACGCATGCATTGGGGTGGTAGTAA
Internal bar code:CTTTCAGTATCTTCTATCATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1663
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:AGCACCACACAGACGGTATG
Suggested primer 2:TGTACAAGGTGAGCTGCAGG