Insertion junction: LMJ.RY0402.200543_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.200543
Chromosome:chromosome 13
Location:128186
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre13.g562850 THF1,PSB29 Thylakoid Formation 1; (1 of 1) PTHR34793:SF1 - PROTEIN THYLAKOID FORMATION 1, CHLOROPLASTIC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTTTGTGCTCAAAAACGGCTCCGGTGTGT
Internal bar code:TCAGTCTCCGTATGTCGCGATT

Confirmation - LEAP-Seq

LEAP-Seq distance:810
LEAP-Seq percent confirming:99.7623
LEAP-Seq n confirming:1259
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGCATGTGCGTGGTTACT
Suggested primer 2:AACGTCTCCTCATCGTCACC