Insertion junction: CLIP2.004209_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.004209
Chromosome:chromosome 13
Location:142406
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g562850 THF1,PSB29 Thylakoid Formation 1; (1 of 1) PTHR34793:SF1 - PROTEIN THYLAKOID FORMATION 1, CHLOROPLASTIC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCCCCTTGGCGTCTGTCTGCCTGCACATCACTGCGCGTCCCCGCGGTT
Internal bar code:CGGGACCTGCGCGATAGTTACT

Confirmation - LEAP-Seq

LEAP-Seq distance:4100
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TGTACAAGGTGAGCTGCAGG
Suggested primer 2:AGCACCACACAGACGGTATG