Insertion junction: LMJ.RY0402.108932_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.108932
Chromosome:chromosome 13
Location:129308
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre13.g562850 THF1,PSB29 Thylakoid Formation 1; (1 of 1) PTHR34793:SF1 - PROTEIN THYLAKOID FORMATION 1, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCCGCCATTCCCAGCCGTACGGAGCAGT
Internal bar code:GGGTTTCCGCAGACGAAGGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:757
LEAP-Seq percent confirming:98.1998
LEAP-Seq n confirming:1091
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTTACAGACGGGGTAAGA
Suggested primer 2:GAGGGGTTGAGTGCACGTAT