Insertion junction: LMJ.RY0402.108932_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.108932
Chromosome:chromosome 13
Location:129307
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre13.g562850 THF1,PSB29 Thylakoid Formation 1; (1 of 1) PTHR34793:SF1 - PROTEIN THYLAKOID FORMATION 1, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGCTGGGTAGGGATGTGGGTGCGCGCAT
Internal bar code:CATCCTAATTAGTCTCGAATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:892
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:257
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTTACAGACGGGGTAAGA
Suggested primer 2:GAGGGGTTGAGTGCACGTAT