Insertion junction: LMJ.RY0402.125062_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.125062
Chromosome:chromosome 13
Location:127869
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre13.g562850 THF1,PSB29 Thylakoid Formation 1; (1 of 1) PTHR34793:SF1 - PROTEIN THYLAKOID FORMATION 1, CHLOROPLASTIC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCGGGATAACGATCCGGTGTAATGGAAT
Internal bar code:GCAATCGTCGTGTGACGCTGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1006
LEAP-Seq percent confirming:99.8302
LEAP-Seq n confirming:2939
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TCTTACCCCGTCTGTAACCG
Suggested primer 2:AGCGAGTGCATGTGTATTGC