Insertion junction: CLIP2.001311_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.001311
Chromosome:chromosome 6
Location:2850166
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g272200 (1 of 3) PF08238 - Sel1 repeat (Sel1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGACAATTGGCCTGTGGGGTCGCTTGTGTGTATTGTGACTGCGGTGAC
Internal bar code:TCCACAAAGTGGCCCCTCTGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2734
LEAP-Seq percent confirming:99.0741
LEAP-Seq n confirming:107
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:108

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTTGCGTGGTATGGATGT
Suggested primer 2:GTGCATACGTTGTCGATGGC