Insertion junction: CLIP2.001371_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.001371
Chromosome:chromosome 6
Location:7160437
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g298300 PPR2,MRL1 rbcL mRNA stabilization factor; (1 of 2) PF01535//PF13812 - PPR repeat (PPR) // Pentatricopeptide repeat domain (PPR_3) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGCGAGCCGTAGGTGGTGGCTGAGGCGCCAATGCCGCGCTGCTGCATCA
Internal bar code:GTATTTGACGTTTCTCCTGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2611
LEAP-Seq percent confirming:95.0
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:GAGTGTCAGTGCCGGTTGTA
Suggested primer 2:AGAAATGCCTGCCTACACCC