| Common name: | PPR2,MRL1 |
| Defline: | rbcL mRNA stabilization factor; (1 of 2) PF01535//PF13812 - PPR repeat (PPR) // Pentatricopeptide repeat domain (PPR_3) |
| Description: | PentatricoPeptide Repeat protein that stabilizes rbcL mRNA in the chloroplast |
| Synonyms: | PPR2,g6900.t1 |
| Chromosome: | chromosome 6 |
We did not create a plasmid for this gene.
We did not determine any protein-protein interactions for this gene.
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.001371_1 | CLIP2.001371 | CDS | 80 | 6.1 |
| CLIP2.001371_2 | CLIP2.001371 | CDS | 80 | 6.1 |
| CLIP2.001429_1 | CLIP2.001429 | 3'UTR | 80 | 6.1 |
| CLIP2.001429_2 | CLIP2.001429 | 3'UTR | 80 | 6.1 |
| CLIP2.001558_3 | CLIP2.001558 | intron | 80 | 6.1 |
| CLIP2.001558_4 | CLIP2.001558 | intron | 80 | 6.1 |
| CLIP2.002183_1 | CLIP2.002183 | 3'UTR | 80 | 6.1 |
| CLIP2.002183_2 | CLIP2.002183 | 3'UTR | 80 | 6.1 |
| CLIP2.003734_1 | CLIP2.003734 | CDS | 80 | 6.1 |
| CLIP2.003734_2 | CLIP2.003734 | CDS | 80 | 6.1 |
| CLIP2.007106_1 | CLIP2.007106 | CDS | 80 | 6.1 |
| LMJ.RY0402.050384_1 | LMJ.RY0402.050384 | 3'UTR | 73 | 5.5 |
| LMJ.RY0402.111480_1 | LMJ.RY0402.111480 | CDS | 73 | 5.5 |
| LMJ.RY0402.155641_1 | LMJ.RY0402.155641 | intron | 95 | 5.5 |
| LMJ.RY0402.155641_2 | LMJ.RY0402.155641 | CDS | 95 | 5.5 |
| LMJ.RY0402.169685_1 | LMJ.RY0402.169685 | CDS | 73 | 5.5 |
| PFAM: | PF01535, PF13812 |
| PANTHER: | PTHR24015 |
| KEGG_ec: | |
| KEGG_orthology: | |
| KOG: | |
| Gene ontology terms:: | |
| Best arabidopsis TAIR name: | AT4G34830.1 |
| Best arabidopsis TAIR symbol: | MRL1 |
| Best arabidopsis TAIR defline: | Pentatricopeptide repeat (PPR) superfamily protein |
| Phytozome Locus Page |
Mutants in this gene exhibit a phenotype under the following conditions:
| Photosynthesis or light sensitivity, screen 2 of 12 ( 94% confidence (FDR = 0.056)) |
| Photosynthesis or light sensitivity, screen 4 of 12 ( 97% confidence (FDR = 0.023)) |
| Photosynthesis or light sensitivity, screen 8 of 12 ( 99% confidence (FDR = 0.0012)) |
| Photosynthesis or light sensitivity, screen 10 of 12 ( 99% confidence (FDR = 0.0012)) |
| Photosynthesis or light sensitivity, screen 11 of 12 ( 99% confidence (FDR = 0.0032)) |
Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.
If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.