Insertion junction: LMJ.RY0402.111480_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.111480
Chromosome:chromosome 6
Location:7253511
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre06.g298300 PPR2,MRL1 rbcL mRNA stabilization factor; (1 of 2) PF01535//PF13812 - PPR repeat (PPR) // Pentatricopeptide repeat domain (PPR_3) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGAACGCATCATGAACCGCTACACCGACC
Internal bar code:ACTAAGGGTGAGAAGAGGCTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:370
LEAP-Seq percent confirming:99.1667
LEAP-Seq n confirming:238
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:AACTGGAAAGTGGGTTGTGC
Suggested primer 2:CATGTCCATCCACACCTTCA