Insertion junction: CLIP2.002183_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.002183
Chromosome:chromosome 6
Location:7154593
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g298300 PPR2,MRL1 rbcL mRNA stabilization factor; (1 of 2) PF01535//PF13812 - PPR repeat (PPR) // Pentatricopeptide repeat domain (PPR_3) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTCGAGCTCCTCTATTCTGCATGCGAAGCCAGAGCTGGTGTTGCCCTGT
Internal bar code:CAATATGGTTCGAAATGTGAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:5423
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:57
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:TTGGAGGAGCACAGCTTCTG
Suggested primer 2:CAACAACCAGTTCCTGCTGC