Insertion junction: CLIP2.003734_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.003734
Chromosome:chromosome 6
Location:7161785
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g298300 PPR2,MRL1 rbcL mRNA stabilization factor; (1 of 2) PF01535//PF13812 - PPR repeat (PPR) // Pentatricopeptide repeat domain (PPR_3) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTATGGCTACGCTCTCTGGGCTCTCAAAGCGGGGCGAATTCGACACGCTG
Internal bar code:AATATGGACCGGTGTGCATTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1479
LEAP-Seq percent confirming:83.871
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:TACAACCGGCACTGACACTC
Suggested primer 2:AAGATAAGACCCCGTCCCGA