Insertion junction: CLIP2.001371_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.001371
Chromosome:chromosome 6
Location:7160439
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g298300 PPR2,MRL1 rbcL mRNA stabilization factor; (1 of 2) PF01535//PF13812 - PPR repeat (PPR) // Pentatricopeptide repeat domain (PPR_3) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCATCGAGTCGTGCGTGTGCGCGCGGCAGCCGGAGAAGGCGTTGCGCGTG
Internal bar code:TCGCAACTGTAGTTGTTAACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2479
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:AGAAATGCCTGCCTACACCC
Suggested primer 2:GAGTGTCAGTGCCGGTTGTA