Insertion junction: LMJ.RY0402.155641_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.155641
Chromosome:chromosome 6
Location:7255628
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre06.g298300 PPR2,MRL1 rbcL mRNA stabilization factor; (1 of 2) PF01535//PF13812 - PPR repeat (PPR) // Pentatricopeptide repeat domain (PPR_3) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCTGGGCACCGGGTACACGCTCTGCTTG
Internal bar code:TAAGATGGGAACTCAAGTATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:160
LEAP-Seq percent confirming:98.3083
LEAP-Seq n confirming:523
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GGATGGAGGTGGTGTTTGAG
Suggested primer 2:GATGCGGTAGGTGTTGAGGT