Insertion junction: CLIP2.001558_4

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.001558
Chromosome:chromosome 6
Location:7158546
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g298300 PPR2,MRL1 rbcL mRNA stabilization factor; (1 of 2) PF01535//PF13812 - PPR repeat (PPR) // Pentatricopeptide repeat domain (PPR_3) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACGTGCAAAGAATTATGGAGTGATGCGCATACCATTGTCATCGGAGTG
Internal bar code:TAGCTTAACCATGAAATCGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3162
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:TGCACAACCCACTTTCCAGT
Suggested primer 2:TCCCTCTCAAACTGCGTCAC