Insertion junction: CLIP2.001379_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.001379
Chromosome:chromosome 16
Location:6781971
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g672300 (1 of 1) PTHR13711//PTHR13711:SF182 - SWI/SNF-RELATED CHROMATIN BINDING PROTEIN // SUBFAMILY NOT NAMED; High mobility group protein 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGAAATCTTTGCCTGCATTCCGCGCACTTGGTGTCGACGTATTGCAAAC
Internal bar code:CGATCAATGCATAGATTGTCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2522
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:57
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:TGAAGGCAAGGGGTGTGTTT
Suggested primer 2:ATAAACTGGGTGCAGCCTCC