Insertion junction: CLIP2.001394_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.001394
Chromosome:chromosome 7
Location:4056853
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g340450 PKHD1 (1 of 1) PTHR11915:SF310 - PICKLED EGGS, ISOFORM A; Similar to Fibrocystin CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCGCCCACTCCAACATGTTCTACGGCCTGCGCATCCACCCCGAGTACT
Internal bar code:AAGCGGTTAGTACAATGCGGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3099
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:CGTTGATGATGCCAGCCATG
Suggested primer 2:TGGACAATGTGGAGGTGACG