Gene: Cre07.g340450

Overview

Common name:PKHD1
Defline:(1 of 1) PTHR11915:SF310 - PICKLED EGGS, ISOFORM A; Similar to Fibrocystin
Description:
Synonyms:g7919.t1
Chromosome:chromosome 7

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction Mutant Strain Insertion Junction Feature Confidence (%) Genome Version
CLIP2.001394_1 CLIP2.001394 CDS 80 6.1
CLIP2.001394_2 CLIP2.001394 CDS 80 6.1
CLIP2.003473_1 CLIP2.003473 CDS 80 6.1
CLIP2.003473_2 CLIP2.003473 CDS 80 6.1
CLIP2.004601_1 CLIP2.004601 CDS 80 6.1
CLIP2.004601_2 CLIP2.004601 CDS 80 6.1
CLIP2.005276_1 CLIP2.005276 CDS 80 6.1
CLIP2.005276_2 CLIP2.005276 CDS 80 6.1
CLIP2.006975_1 CLIP2.006975 CDS 80 6.1
CLIP2.006975_2 CLIP2.006975 CDS 80 6.1
LMJ.RY0402.057829_1 LMJ.RY0402.057829 CDS 58 5.5
LMJ.RY0402.104255_1 LMJ.RY0402.104255 CDS 73 5.5
LMJ.RY0402.105975_1 LMJ.RY0402.105975 3'UTR 95 5.5
LMJ.RY0402.105975_2 LMJ.RY0402.105975 3'UTR 95 5.5
LMJ.RY0402.106934_1 LMJ.RY0402.106934 CDS/intron 73 5.5
LMJ.RY0402.134959_1 LMJ.RY0402.134959 intron 95 5.5
LMJ.RY0402.134959_2 LMJ.RY0402.134959 intron 95 5.5
LMJ.RY0402.157453_1 LMJ.RY0402.157453 CDS 95 5.5
LMJ.RY0402.157453_2 LMJ.RY0402.157453 CDS 95 5.5
LMJ.RY0402.158627_1 LMJ.RY0402.158627 3'UTR 95 5.5
LMJ.RY0402.158627_2 LMJ.RY0402.158627 3'UTR 95 5.5
LMJ.RY0402.160894_1 LMJ.RY0402.160894 intron 73 5.5
LMJ.RY0402.161161_1 LMJ.RY0402.161161 3'UTR 73 5.5
LMJ.RY0402.162029_1 LMJ.RY0402.162029 CDS 95 5.5
LMJ.RY0402.162029_2 LMJ.RY0402.162029 CDS 95 5.5
LMJ.RY0402.171069_1 LMJ.RY0402.171069 CDS 58 5.5
LMJ.RY0402.178186_1 LMJ.RY0402.178186 CDS 73 5.5
LMJ.RY0402.197474_2 LMJ.RY0402.197474 CDS 73 5.5
LMJ.RY0402.199073_1 LMJ.RY0402.199073 CDS 95 5.5
LMJ.RY0402.199073_2 LMJ.RY0402.199073 intron 95 5.5
LMJ.RY0402.199728_1 LMJ.RY0402.199728 5'UTR 95 5.5
LMJ.RY0402.199728_2 LMJ.RY0402.199728 5'UTR 95 5.5
LMJ.RY0402.203621_1 LMJ.RY0402.203621 intron 73 5.5
LMJ.RY0402.240699_1 LMJ.RY0402.240699 intron 95 5.5
LMJ.RY0402.240699_2 LMJ.RY0402.240699 intron 95 5.5
LMJ.SG0182.004744_1 LMJ.SG0182.004744 CDS 75 5.3

Gene Annotations

PFAM:PF01833, PF07691, PF10162
PANTHER: PTHR11915 PTHR11915:SF310
KEGG_ec:
KEGG_orthology:
KOG:
Gene ontology terms::GO:0005515
Best arabidopsis TAIR name:
Best arabidopsis TAIR symbol:
Best arabidopsis TAIR defline:
Phytozome Locus Page

Phenotypes

Mutants in this gene exhibit a phenotype under the following conditions:

Paromomycin, screen 1 of 6 ( 80% confidence (FDR = 0.2))
Paromomycin, screen 3 of 6 ( 98% confidence (FDR = 0.017))
Paromomycin, screen 4 of 6 ( 82% confidence (FDR = 0.18))

Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.

If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.