Gene: Cre07.g340450 (Genome version: v5.5)

Overview

Common name:
Defline:
Description:
Synonyms:	g7919.t1
Chromosome:	chromosome_7

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction	Mutant Strain	Orientation	Insertion Junction Feature	Confidence (%)
LMJ.RY0402.057829_1	LMJ.RY0402.057829	sense	CDS	58
LMJ.RY0402.104255_1	LMJ.RY0402.104255	antisense	CDS	73
LMJ.RY0402.105975_1	LMJ.RY0402.105975	antisense	3'UTR	95
LMJ.RY0402.105975_2	LMJ.RY0402.105975	antisense	3'UTR	95
LMJ.RY0402.106934_1	LMJ.RY0402.106934	antisense	CDS/intron	73
LMJ.RY0402.134959_1	LMJ.RY0402.134959	antisense	intron	95
LMJ.RY0402.134959_2	LMJ.RY0402.134959	antisense	intron	95
LMJ.RY0402.157453_1	LMJ.RY0402.157453	sense	CDS	95
LMJ.RY0402.157453_2	LMJ.RY0402.157453	sense	CDS	95
LMJ.RY0402.158627_1	LMJ.RY0402.158627	antisense	3'UTR	95
LMJ.RY0402.158627_2	LMJ.RY0402.158627	sense	3'UTR	95
LMJ.RY0402.160894_1	LMJ.RY0402.160894	sense	intron	73
LMJ.RY0402.161161_1	LMJ.RY0402.161161	antisense	3'UTR	73
LMJ.RY0402.162029_1	LMJ.RY0402.162029	sense	CDS	95
LMJ.RY0402.162029_2	LMJ.RY0402.162029	sense	CDS	95
LMJ.RY0402.171069_1	LMJ.RY0402.171069	sense	CDS	58
LMJ.RY0402.178186_1	LMJ.RY0402.178186	antisense	CDS	73
LMJ.RY0402.197474_2	LMJ.RY0402.197474	sense	CDS	73
LMJ.RY0402.199073_1	LMJ.RY0402.199073	antisense	CDS	95
LMJ.RY0402.199073_2	LMJ.RY0402.199073	antisense	intron	95
LMJ.RY0402.199728_1	LMJ.RY0402.199728	sense	5'UTR	95
LMJ.RY0402.199728_2	LMJ.RY0402.199728	sense	5'UTR	95
LMJ.RY0402.203621_1	LMJ.RY0402.203621	antisense	intron	73
LMJ.RY0402.240699_1	LMJ.RY0402.240699	antisense	intron	95
LMJ.RY0402.240699_2	LMJ.RY0402.240699	antisense	intron	95

Gene Annotations

PFAM:	PF01833, PF10162, PF07691
PANTHER:	PTHR25069:SF29 PTHR25069
KEGG_ec:
KEGG_orthology:
KOG:
Gene ontology terms::	GO:0005515
Best arabidopsis TAIR name:
Best arabidopsis TAIR symbol:
Best arabidopsis TAIR defline:
Phytozome Locus Page

Phenotypes

Mutants in this gene exhibit a phenotype under the following conditions:

Paromomycin, screen 1 of 6 ( 80% confidence (FDR = 0.2))

Paromomycin, screen 3 of 6 ( 98% confidence (FDR = 0.017))

Paromomycin, screen 4 of 6 ( 82% confidence (FDR = 0.18))

Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.

If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.

Gene: Cre07.g340450 (Genome version: v5.3)

Overview

Common name:
Defline:
Description:
Synonyms:	g7919,Cre07.g340450
Chromosome:	chromosome_7

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction	Mutant Strain	Orientation	Insertion Junction Feature	Confidence (%)
LMJ.SG0182.004744_1	LMJ.SG0182.004744	antisense	CDS	75

Gene Annotations

PFAM:	PF01833, PF10162, PF07691
PANTHER:	PTHR25069 PTHR25069:SF29
KEGG_ec:
KEGG_orthology:
KOG:
Gene ontology terms::
Best arabidopsis TAIR name:
Best arabidopsis TAIR symbol:
Best arabidopsis TAIR defline:
Phytozome Locus Page

Phenotypes

Our phenotype screens did not find statistically significant results for this gene.