Insertion junction: CLIP2.006975_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.006975
Chromosome:chromosome 7
Location:4053748
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g340450 PKHD1 (1 of 1) PTHR11915:SF310 - PICKLED EGGS, ISOFORM A; Similar to Fibrocystin CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGACCTTGCTCATGTCGGAGCTGGGCACAGTCAAGTTGGCGTACAGGTC
Internal bar code:CTGGATGCGTTGACGGGGAAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:5107
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGCAGCAGGAGAATGTGA
Suggested primer 2:GTTGGTGAAGCCCCACGATA