Insertion junction: LMJ.RY0402.171069_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.171069
Chromosome:chromosome 7
Location:4066919
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre07.g340450 PKHD1 (1 of 1) PTHR11915:SF310 - PICKLED EGGS, ISOFORM A; Similar to Fibrocystin CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACTCCACCGCGACCATCCTGAAGGGCGT
Internal bar code:CCGGGATCTAGGTGCATCTCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:411
LEAP-Seq percent confirming:68.299
LEAP-Seq n confirming:2120
LEAP-Seq n nonconfirming:984
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTGTGGGCAGCATTATGT
Suggested primer 2:GGAGCAGTAGCATGTAGCCC