Insertion junction: CLIP2.003473_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.003473
Chromosome:chromosome 7
Location:4055167
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g340450 PKHD1 (1 of 1) PTHR11915:SF310 - PICKLED EGGS, ISOFORM A; Similar to Fibrocystin CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTCGCCAATGGTGATGGTGGTGGCCACGCCCAGCGCAAAGTTGGTGCC
Internal bar code:ACCCTCATGCTGTCAGCGTGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2426
LEAP-Seq percent confirming:73.5294
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:TATCGTGGGGCTTCACCAAC
Suggested primer 2:TGAAAACGTCTAGGCCACCC