Insertion junction: CLIP2.004601_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.004601
Chromosome:chromosome 7
Location:4057482
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g340450 PKHD1 (1 of 1) PTHR11915:SF310 - PICKLED EGGS, ISOFORM A; Similar to Fibrocystin CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGCTACTGGTCGTGGGGCCACCAGGGCATCTACCAGGACACCGACGGC
Internal bar code:TTGACAATCTTTATCATGGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:4321
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:57
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:AACTCACGTGAAGGAGCTGG
Suggested primer 2:ACGTTCTGGATCACCAACCC