Insertion junction: CLIP2.004601_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.004601
Chromosome:chromosome 7
Location:4057479
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g340450 PKHD1 (1 of 1) PTHR11915:SF310 - PICKLED EGGS, ISOFORM A; Similar to Fibrocystin CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGCTTGCCGCCGTCACTCTGCACGAACTTGAGGCCGGACGTGAAGGCG
Internal bar code:AGTCTAAGGGATGGCGCTAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3066
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:ACGTTCTGGATCACCAACCC
Suggested primer 2:AACTCACGTGAAGGAGCTGG