Insertion junction: LMJ.RY0402.161161_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.161161
Chromosome:chromosome 7
Location:4082588
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre07.g340450 PKHD1 (1 of 1) PTHR11915:SF310 - PICKLED EGGS, ISOFORM A; Similar to Fibrocystin 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTCACAAACACAGCTGCCACGGTGTAACT
Internal bar code:TCAAATCAATCGCGCTACAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:735
LEAP-Seq percent confirming:99.403
LEAP-Seq n confirming:5495
LEAP-Seq n nonconfirming:33
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTTCGTGGTATGCGGTAA
Suggested primer 2:AGCTTGGACAGTGTGTGACG