Insertion junction: CLIP2.001551_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.001551
Chromosome:chromosome 6
Location:109183
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g249750 (1 of 1) PF07382//PF13374 - Histone H1-like nucleoprotein HC2 (HC2) // Tetratricopeptide repeat (TPR_10) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACTGGACCGACAAGTTGCTGGCTGGCTGGAAGTTTGCTGATGCGCATTC
Internal bar code:AGAACGGTAGGCACCGGGGGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2200
LEAP-Seq percent confirming:93.9394
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:GGGCAGTCGACGTTTAGACA
Suggested primer 2:CAGCCTCTGTCAGTGAGCAA