Insertion junction: CLIP2.001551_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.001551
Chromosome:chromosome 6
Location:109186
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g249750 (1 of 1) PF07382//PF13374 - Histone H1-like nucleoprotein HC2 (HC2) // Tetratricopeptide repeat (TPR_10) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGCGTTCGACCAGCCATGCACTCCTGCTCTGCCGCTGCAAACTGTTTG
Internal bar code:TCTCTAAAGATACTCTCTTGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2520
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCCTCTGTCAGTGAGCAA
Suggested primer 2:GGGCAGTCGACGTTTAGACA