Insertion junction: CLIP2.001553_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.001553
Chromosome:chromosome 12
Location:7627192
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g555650 (1 of 30) PF03407 - Nucleotide-diphospho-sugar transferase (Nucleotid_trans) 3'UTR
Cre12.g555700 DNJ15 DnaJ-like protein; (1 of 5) IPR000104//IPR001623 - Antifreeze protein, type I // DnaJ domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGCGGAGGGCTGATGATGTGATTGTTTGTCGAGCGGACATCCGGTGACC
Internal bar code:AGATGATGTTTACCGTATCGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1738
LEAP-Seq percent confirming:97.4359
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:GCAAGCAAACACAGCACGTA
Suggested primer 2:GCTTGGTGGCTTGATTGGTG