Gene: Cre12.g555700

Overview

Common name:DNJ15
Defline:DnaJ-like protein; (1 of 5) IPR000104//IPR001623 - Antifreeze protein, type I // DnaJ domain
Description:DnaJ-like protein; perhaps targeted to chloroplast, since it contains N-terminal extension which is predicted by ChloroP to be chloroplast transit peptide; no similarity to other proteins in protein database; contains N-terminal J-domain (pfam226)
Synonyms:g13418.t1,DNJ15
Chromosome:chromosome 12

Protein Localization

A plasmid for expressing Cre12.g555700 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre12.g555700-Venus-3xFLAG

Imaged strain: CSI_LW07D7

Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.

Classification(s):

chloroplast/homogeneous/pyrenoid depleted

If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.

VenusChlorophyllBright fieldMerged

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction Mutant Strain Insertion Junction Feature Confidence (%) Genome Version
CLIP2.001553_1 CLIP2.001553 3'UTR 80 6.1
CLIP2.001553_2 CLIP2.001553 3'UTR 80 6.1
CLIP2.002054_1 CLIP2.002054 5'UTR 80 6.1
CLIP2.002054_2 CLIP2.002054 5'UTR 80 6.1
CLIP2.002294_1 CLIP2.002294 5'UTR 80 6.1
CLIP2.002849_1 CLIP2.002849 3'UTR 80 6.1
CLIP2.002849_2 CLIP2.002849 3'UTR 80 6.1
CLIP2.003819_1 CLIP2.003819 CDS 80 6.1
CLIP2.003819_2 CLIP2.003819 CDS 80 6.1
CLIP2.005469_1 CLIP2.005469 intron 80 6.1
CLIP2.005469_2 CLIP2.005469 intron 80 6.1
LMJ.RY0402.064005_1 LMJ.RY0402.064005 5'UTR 73 5.5
LMJ.RY0402.100436_2 LMJ.RY0402.100436 3'UTR 73 5.5
LMJ.RY0402.135611_1 LMJ.RY0402.135611 intron 73 5.5
LMJ.RY0402.154691_1 LMJ.RY0402.154691 3'UTR 95 5.5
LMJ.RY0402.154691_2 LMJ.RY0402.154691 3'UTR 95 5.5
LMJ.RY0402.172368_1 LMJ.RY0402.172368 intron 73 5.5
LMJ.RY0402.218939_1 LMJ.RY0402.218939 intron 58 5.5
LMJ.RY0402.228322_1 LMJ.RY0402.228322 CDS 95 5.5
LMJ.RY0402.228322_2 LMJ.RY0402.228322 3'UTR 95 5.5
LMJ.RY0402.228322_3 LMJ.RY0402.228322 3'UTR 95 5.5
LMJ.RY0402.242951_1 LMJ.RY0402.242951 CDS 73 5.5

Gene Annotations

PFAM:PF00226
PANTHER: PTHR24078
KEGG_ec:
KEGG_orthology:
KOG:
Gene ontology terms::GO:0042309, GO:0050825, GO:0050826
Best arabidopsis TAIR name:AT2G22360.1
Best arabidopsis TAIR symbol:
Best arabidopsis TAIR defline:DNAJ heat shock family protein
Phytozome Locus Page

Phenotypes

Our phenotype screens did not find statistically significant results for this gene.