Insertion junction: CLIP2.001553_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.001553
Chromosome:chromosome 12
Location:7627195
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g555650 (1 of 30) PF03407 - Nucleotide-diphospho-sugar transferase (Nucleotid_trans) 3'UTR
Cre12.g555700 DNJ15 DnaJ-like protein; (1 of 5) IPR000104//IPR001623 - Antifreeze protein, type I // DnaJ domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACTTTGTACACGCCATGGGTTTCAGGGTTTCGAGTGACTCTACGCTCAT
Internal bar code:AGATGATGTTTACCGTATCGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1582
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTGGTGGCTTGATTGGTG
Suggested primer 2:GCAAGCAAACACAGCACGTA