Insertion junction: CLIP2.005469_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.005469
Chromosome:chromosome 12
Location:7624363
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g555700 DNJ15 DnaJ-like protein; (1 of 5) IPR000104//IPR001623 - Antifreeze protein, type I // DnaJ domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTGTGCGGTCCGGTCCGGCAAGGTCCCAACACGGACAGGAGCATGAGCA
Internal bar code:TTTTATACGTATGCCAGCCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2280
LEAP-Seq percent confirming:62.5
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:GACCCTCACACTACCACTGC
Suggested primer 2:CCGTCTCGAAAATGCTGCTG