Insertion junction: CLIP2.003819_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.003819
Chromosome:chromosome 12
Location:7624228
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g555700 DNJ15 DnaJ-like protein; (1 of 5) IPR000104//IPR001623 - Antifreeze protein, type I // DnaJ domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACTGCAAGGTGTGTCCAAGCGAGCTCAAGGGAAGGGAACACACAGGACT
Internal bar code:ATGAGTTCGTAATGGGCCGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1771
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:AGTGATGGAAGGGCAAGGTG
Suggested primer 2:CCGCTAGTTGCAGAAGGACA