Insertion junction: CLIP2.001602_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.001602
Chromosome:chromosome 12
Location:1775205
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g485800 FTSH1,FHL1 FtsH-like membrane ATPase/metalloprotease; (1 of 1) PTHR23076//PTHR23076:SF33 - METALLOPROTEASE M41 FTSH // ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 1, CHLOROPLASTIC-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTAACTCACCGCCACGTCATCGAACACCACGCCAGTCTCGGGCACCTC
Internal bar code:ATTCCAGGAGGGTAAATACGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2528
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:56
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:GGGATATGGGAGCCGAACAG
Suggested primer 2:ACGAACACCTCCACGAACTC