Gene: Cre12.g485800
Overview
| Common name: | FTSH1,FHL1 |
| Defline: | FtsH-like membrane ATPase/metalloprotease; (1 of 1) PTHR23076//PTHR23076:SF33 - METALLOPROTEASE M41 FTSH // ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 1, CHLOROPLASTIC-RELATED |
| Description: | FtsH protease 1, type A; Chloroplast-targeted; Membrane-bound metalloprotease (M41) with AAA domain; Ortholog of Arabidopsis FtsH5=Var1 and FtsH1; |
| Synonyms: | FHL1,g12281.t1,Cre12.g485800.t1.1 |
| Chromosome: | chromosome 12 |
Protein Localization
A plasmid for expressing Cre12.g485800 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre12.g485800-Venus-3xFLAG
Imaged strain: CSI_LW08A9
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
chloroplast/homogeneous/pyrenoid depleted
shapes in cytoplasm/a few small puncta|vesicles in cytoplasm
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
| Bait ID | Bait Name | Prey ID | Prey Name | Reference |
|---|---|---|---|---|
| Cre06.g278195 | CTI,CTI1 | Cre12.g485800 | FTSH1,FHL1 | Wang et al. 2023 |
| Cre06.g295350 | Cre12.g485800 | FTSH1,FHL1 | Wang et al. 2023 |
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.001602_3 | CLIP2.001602 | intron | 80 | 6.1 |
| CLIP2.001602_4 | CLIP2.001602 | intron | 80 | 6.1 |
| CLIP2.005559_1 | CLIP2.005559 | outside_mRNA | 80 | 6.1 |
| CLIP2.005559_2 | CLIP2.005559 | outside_mRNA | 80 | 6.1 |
| CLIP2.007554_1 | CLIP2.007554 | 3'UTR | 80 | 6.1 |
| LMJ.RY0402.055567_1 | LMJ.RY0402.055567 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.055567_2 | LMJ.RY0402.055567 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.074989_1 | LMJ.RY0402.074989 | 3'UTR | 73 | 5.5 |
| LMJ.RY0402.167097_1 | LMJ.RY0402.167097 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.167097_2 | LMJ.RY0402.167097 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.193283_1 | LMJ.RY0402.193283 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.193283_2 | LMJ.RY0402.193283 | 3'UTR | 95 | 5.5 |
| LMJ.SG0182.002735_1 | LMJ.SG0182.002735 | 3'UTR | 75 | 5.3 |
Gene Annotations
| PFAM: | PF00004, PF01434 |
| PANTHER: | PTHR23076 PTHR23076:SF33 |
| KEGG_ec: | 3.4.24.- |
| KEGG_orthology: | K03798 |
| KOG: | KOG0731 |
| Gene ontology terms:: | GO:0004222, GO:0005524, GO:0006508, GO:0016020 |
| Best arabidopsis TAIR name: | AT5G42270 |
| Best arabidopsis TAIR symbol: | FTSH5,VAR1 |
| Best arabidopsis TAIR defline: | FtsH extracellular protease family |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.