Insertion junction: LMJ.RY0402.055567_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.055567
Chromosome:chromosome 12
Location:1683775
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g485800 FTSH1,FHL1 FtsH-like membrane ATPase/metalloprotease; (1 of 1) PTHR23076//PTHR23076:SF33 - METALLOPROTEASE M41 FTSH // ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 1, CHLOROPLASTIC-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTGACACCTTGACCCACGTTTGCGACCA
Internal bar code:ACGTTGCCAGGAGTTCGGAGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:861
LEAP-Seq percent confirming:99.3888
LEAP-Seq n confirming:3252
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGAGCTGTAGAGGGGACG
Suggested primer 2:CGTGCCTGATCTGTCTTTCA