Insertion junction: CLIP2.007554_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.007554
Chromosome:chromosome 12
Location:1772318
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g485800 FTSH1,FHL1 FtsH-like membrane ATPase/metalloprotease; (1 of 1) PTHR23076//PTHR23076:SF33 - METALLOPROTEASE M41 FTSH // ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 1, CHLOROPLASTIC-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTAACCATCAGCATGTGTCACCACCACCATGGGTCATTTCTGCTGTCG
Internal bar code:AACGTTGTGGCAGATTCGATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4512
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:96
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:96

Suggested primers for confirmation by PCR

Suggested primer 1:CGACGAGATTGACTCCGAGG
Suggested primer 2:CAGCTGTGCAAACCTGACAC