Insertion junction: CLIP2.005559_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.005559
Chromosome:chromosome 12
Location:1771723
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g485800 FTSH1,FHL1 FtsH-like membrane ATPase/metalloprotease; (1 of 1) PTHR23076//PTHR23076:SF33 - METALLOPROTEASE M41 FTSH // ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 1, CHLOROPLASTIC-RELATED outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGATGCTGCGGGGCTCACCCCATTGTCCAGCTGTGCAAACCTGACACCTT
Internal bar code:GTTGGATCTGCTCTTTACCAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:6010
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:58
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:58

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGTTAGGTAGGCGGGAGT
Suggested primer 2:CTATGAGGCTGCGGAGACAG