Insertion junction: LMJ.RY0402.167097_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.167097
Chromosome:chromosome 12
Location:1684701
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g485800 FTSH1,FHL1 FtsH-like membrane ATPase/metalloprotease; (1 of 1) PTHR23076//PTHR23076:SF33 - METALLOPROTEASE M41 FTSH // ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 1, CHLOROPLASTIC-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATATGATGATGATGCACAGTCGCAGCTCA
Internal bar code:CCCCCATCCCGGGTCCTACTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:843
LEAP-Seq percent confirming:99.8334
LEAP-Seq n confirming:2397
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TACCTGGAGAACCAGATGGC
Suggested primer 2:GTACACATGCTTGACCCGTG