Insertion junction: CLIP2.001615_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.001615
Chromosome:chromosome 12
Location:3721845
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g514050 GSF1 (1 of 1) 1.4.7.1 - Glutamate synthase (ferredoxin) / Ferredoxin-dependent glutamate synthase; Ferredoxin-dependent glutamate synthase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCATCTACCACCGCCGCTTCTCCACCAACACCACCCCCAAGTGGCCACT
Internal bar code:ATCCTTTTTTCATTATTACTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:918
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:TCTACTGTAGACACCGGCCA
Suggested primer 2:CGATGACTCGGGAGATGGTG