Gene: Cre12.g514050

Overview

Common name:GSF1
Defline:(1 of 1) 1.4.7.1 - Glutamate synthase (ferredoxin) / Ferredoxin-dependent glutamate synthase; Ferredoxin-dependent glutamate synthase
Description:Glutamate synthase, ferredoxin-dependent; also known as CRFG3 (genbank id ; AF135592), could be chloroplast targeted
Synonyms:Cre12.g514050.t1.1,GSF1,g12689.t1
Chromosome:chromosome 12

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction Mutant Strain Insertion Junction Feature Confidence (%) Genome Version
CLIP2.001615_1 CLIP2.001615 CDS 80 6.1
CLIP2.001615_2 CLIP2.001615 CDS 80 6.1
CLIP2.002011_1 CLIP2.002011 CDS 80 6.1
CLIP2.002011_2 CLIP2.002011 CDS 80 6.1
CLIP2.002736_1 CLIP2.002736 3'UTR 80 6.1
CLIP2.002736_2 CLIP2.002736 3'UTR 80 6.1
CLIP2.005258_1 CLIP2.005258 CDS 80 6.1
CLIP2.005258_2 CLIP2.005258 CDS 80 6.1
CLIP2.006525_1 CLIP2.006525 CDS 80 6.1
CLIP2.006525_2 CLIP2.006525 CDS 80 6.1
CLIP2.060716_1 CLIP2.060716 3'UTR 80 6.1
CLIP2.077450_1 CLIP2.077450 3'UTR 80 6.1
LMJ.RY0402.041971_1 LMJ.RY0402.041971 3'UTR 95 5.5
LMJ.RY0402.041971_2 LMJ.RY0402.041971 3'UTR 95 5.5
LMJ.RY0402.045171_1 LMJ.RY0402.045171 5'UTR 95 5.5
LMJ.RY0402.045171_2 LMJ.RY0402.045171 5'UTR 95 5.5
LMJ.RY0402.160557_2 LMJ.RY0402.160557 CDS 58 5.5
LMJ.RY0402.169862_1 LMJ.RY0402.169862 3'UTR 95 5.5
LMJ.RY0402.169862_2 LMJ.RY0402.169862 3'UTR 95 5.5
LMJ.RY0402.185107_1 LMJ.RY0402.185107 5'UTR 95 5.5
LMJ.RY0402.185107_2 LMJ.RY0402.185107 5'UTR 95 5.5
LMJ.RY0402.187865_1 LMJ.RY0402.187865 5'UTR 73 5.5
LMJ.RY0402.238492_2 LMJ.RY0402.238492 intron 73 5.5
LMJ.RY0402.247636_1 LMJ.RY0402.247636 5'UTR 95 5.5
LMJ.RY0402.247636_2 LMJ.RY0402.247636 5'UTR 95 5.5

Gene Annotations

PFAM:PF00310, PF01493, PF01645, PF04898
PANTHER: PTHR11938 PTHR11938:SF76
KEGG_ec:EC:1.4.7.1
KEGG_orthology:K00284
KOG:KOG0399
Gene ontology terms::GO:0006537, GO:0006807, GO:0008152, GO:0015930, GO:0016491, GO:0016638, GO:0055114
Best arabidopsis TAIR name:AT5G04140
Best arabidopsis TAIR symbol:FD-GOGAT,GLS1,GLU1,GLUS
Best arabidopsis TAIR defline:glutamate synthase 1
Phytozome Locus Page

Phenotypes

Mutants in this gene exhibit a phenotype under the following conditions:

High pH, screen 2 of 2 ( 89% confidence (FDR = 0.11))
Photosynthesis or light sensitivity, screen 1 of 12 ( 93% confidence (FDR = 0.064))
Photosynthesis or light sensitivity, screen 3 of 12 ( 91% confidence (FDR = 0.087))
Photosynthesis or light sensitivity, screen 7 of 12 ( 90% confidence (FDR = 0.1))
Photosynthesis or light sensitivity, screen 8 of 12 ( 78% confidence (FDR = 0.22))
Photosynthesis or light sensitivity, screen 9 of 12 ( 70% confidence (FDR = 0.3))
Photosynthesis or light sensitivity, screen 12 of 12 ( 94% confidence (FDR = 0.06))

Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.

If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.