Insertion junction: CLIP2.002736_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.002736
Chromosome:chromosome 12
Location:3714594
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g514000 LAG1 Predicted protein related to longevity assurance protein; (1 of 5) 2.3.1.24 - Sphingosine N-acyltransferase 5'UTR
Cre12.g514050 GSF1 (1 of 1) 1.4.7.1 - Glutamate synthase (ferredoxin) / Ferredoxin-dependent glutamate synthase; Ferredoxin-dependent glutamate synthase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAACAGTTAGTTGCTTCCAGAGACTCTTCTGCACACGCGCCTATTATGTT
Internal bar code:GGATACAGGTATTCGTGGTATT

Confirmation - LEAP-Seq

LEAP-Seq distance:3841
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:87
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:87

Suggested primers for confirmation by PCR

Suggested primer 1:GCGAAGAGATGAGCGGATGA
Suggested primer 2:TCCTCTGCCTTCTCCTCCTC