Insertion junction: CLIP2.002011_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.002011
Chromosome:chromosome 12
Location:3721849
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g514050 GSF1 (1 of 1) 1.4.7.1 - Glutamate synthase (ferredoxin) / Ferredoxin-dependent glutamate synthase; Ferredoxin-dependent glutamate synthase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCGCCATCTACCACCGCCGCTTCTCCACCAACACCACCCCCAAGTGGC
Internal bar code:GGTGGTGTGCTATGCAGTACGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2892
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TCTACTGTAGACACCGGCCA
Suggested primer 2:CGATGACTCGGGAGATGGTG