Insertion junction: CLIP2.005258_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.005258
Chromosome:chromosome 12
Location:3718024
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g514050 GSF1 (1 of 1) 1.4.7.1 - Glutamate synthase (ferredoxin) / Ferredoxin-dependent glutamate synthase; Ferredoxin-dependent glutamate synthase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACCATGGCCAAGCTGCTGCACAAGGCCATCGGCCTGGGCAACGGCTCCG
Internal bar code:ATTGTGTGGGGCCAGATTATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4231
LEAP-Seq percent confirming:83.7209
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:AGTAGATGTCGTGGTGGGGA
Suggested primer 2:ACTGGGACTTTTGCGTTGGA