Insertion junction: CLIP2.002736_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.002736
Chromosome:chromosome 12
Location:3714578
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g514000 LAG1 Predicted protein related to longevity assurance protein; (1 of 5) 2.3.1.24 - Sphingosine N-acyltransferase 5'UTR
Cre12.g514050 GSF1 (1 of 1) 1.4.7.1 - Glutamate synthase (ferredoxin) / Ferredoxin-dependent glutamate synthase; Ferredoxin-dependent glutamate synthase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGAGATATTTTGGTGACTCAACCTTTCTGGGTCCAACAAGGACAGGCA
Internal bar code:ATTCTCTTCGAGTTAGAGTAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2249
LEAP-Seq percent confirming:96.4286
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTCTGCCTTCTCCTCCTC
Suggested primer 2:GCGAAGAGATGAGCGGATGA