Insertion junction: LMJ.RY0402.238492_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.238492
Chromosome:chromosome 12
Location:3625928
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre12.g514050 GSF1 (1 of 1) 1.4.7.1 - Glutamate synthase (ferredoxin) / Ferredoxin-dependent glutamate synthase; Ferredoxin-dependent glutamate synthase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCAGAAGTAGGGGCTGGAGCCGGTCCGG
Internal bar code:TGCATCACCGTTAGGGCGGAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:539
LEAP-Seq percent confirming:98.3333
LEAP-Seq n confirming:236
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GGCAATAGTCGCTTAGCAGG
Suggested primer 2:CAGCTCTCCAGTTACCCAGC