Insertion junction: CLIP2.005258_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.005258
Chromosome:chromosome 12
Location:3718017
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g514050 GSF1 (1 of 1) 1.4.7.1 - Glutamate synthase (ferredoxin) / Ferredoxin-dependent glutamate synthase; Ferredoxin-dependent glutamate synthase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGGTCTGGTTGTTGGAGTGGAACTCACCTGGGAGGCGAATCAGGCGTG
Internal bar code:GTGAACTGTATAGAGAGAGCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:2866
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGGGACTTTTGCGTTGGA
Suggested primer 2:AGTAGATGTCGTGGTGGGGA